Bioinformatics@Becker

Updates and Musings from the Bioinformatics team at Becker Medical Library


Entries Tagged as 'variation'

NCBI’s ClinVar

November 9th, 2012 by Kristi · No Comments

Interested in integrating data from clinical genetic testing and the literature in a single place? ClinVar aggregates information from a variety of sources about sequence variation and its relationship to human health in a single centralized location. from Intro to ClinVar: The goal of ClinVar is to provide a freely accessible, public archive of reports [...]

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Tags:2012, clinical, gene, genetic, informatics, NCBI, repository, sequence, variation

dbVar — Database of Genomic Structural Variation

September 30th, 2010 by Kristi · No Comments

The folks at NCBI are at it again!  They’ve recently launched the Database of Genomic Structural Variation or dbVar.  dbVAR “contains information about large-scale genomic variation, including large insertions, deletions, translocations and inversions. dbVar also provides associations of defined variants with phenotype information” and will contribute to our understanding of  how differences in DNA contribute [...]

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Tags:genome, NCBI, variation

OpenHelix Tutorials Now Available

April 27th, 2010 by Kristi · No Comments

The Becker Medical Library has purchased a campus subscription to OpenHelix giving faculty, students and staff access to over 90 tutorial suites on bioinformatics and genomic resources. OpenHelix provides tutorials covering many types of resources including protein databases, bioinformatics analysis tools, model organism databases, SNP databases, comparative genomics, pathway and interaction resources and much more. [...]

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Tags:bioinformatics, database, genome browser, genomics, informatics, Information, sequence, software, tutorial, variation, visualization, Washington University

Database of Genomic Structural Variation (dbVar) released

March 22nd, 2010 by Kristi · No Comments

From NCBI News: The newly released Database of Genomic Structural Variation (dbVar) contains data and analyses from studies on large-scale genomic variation and provides associations of defined variants with phenotype information. The dbVar homepage provides additional documentation including an overview of structural variation, a Frequently Asked Questions list, and information on submitting data. A dbVar RSS feed [...]

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Tags:database, genomics, NCBI, variation